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BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes
Authors: I de Santiago, W Liu, M O’Reilly, K Yuan, CSR Chilamakuri, BAJ Ponder, KB...
Research group: Markowetz Group
E-pub date: 12 Dec 2016
Journal name:

FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.
Authors: KM Jozwik, I Chernukhin, AA Serandour, S Nagarajan, JS Carroll
Research group: Carroll Group
E-pub date: 6 Dec 2016
Journal name: Cell Rep

Exploratory Analysis of TP53 Mutations in Circulating Tumour DNA as Biomarkers of Treatment Response for Patients with Relapsed High-Grade Serous Ovarian Carcinoma: A Retrospective Study.
Authors: CA Parkinson, D Gale, AM Piskorz, H Biggs, C Hodgkin, H Addley, S Freeman, ...
Research group: Genomics, Brenton Group,
E-pub date: 1 Dec 2016
Journal name: PLoS Med

Patterns of Immune Infiltration in Breast Cancer and Their Clinical Implications: A Gene-Expression-Based Retrospective Study.
Authors: HR Ali, L Chlon, PDP Pharoah, F Markowetz, C Caldas
Research group: Markowetz Group, Ali Group
E-pub date: 1 Dec 2016
Journal name: PLoS Med

373 Feasibility of monitoring response to the PARP inhibitor rucaparib with targeted deep sequencing of circulating tumor DNA (ctDNA) in women with high grade ovarian carcinoma on the ARIEL2 trial
Authors: AM Piskorz, KK Lin, J Morris, E Mann, A Oza, RL Coleman, DM O'Malley, M Fri...
Research group: Brenton Group
E-pub date: 1 Dec 2016
Journal name: European Journal of Cancer

The relationship between endogenous thymidine concentrations and [(18)F]FLT uptake in a range of preclinical tumour models.
Authors: K Heinzmann, DJ Honess, DY Lewis, D-M Smith, C Cawthorne, H Keen, S Heskamp...
Research group:
E-pub date: 1 Dec 2016
Journal name: EJNMMI Res

Prelamin A impairs 53BP1 nuclear entry by mislocalizing NUP153 and disrupting the Ran gradient.
Authors: AM Cobb, D Larrieu, DT Warren, Y Liu, S Srivastava, AJO Smith, RP Bowater, ...
Research group: Jackson Group
E-pub date: 1 Dec 2016
Journal name: Aging Cell

A phylogenetic latent feature model for clonal deconvolution
Authors: F Marass, F Mouliere, K Yuan, N Rosenfeld, F Markowetz
Research group: Markowetz Group,
E-pub date: 1 Dec 2016
Journal name: Annals of Applied Statistics