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DSBCapture: in situ capture and sequencing of DNA breaks.

Abstract:
Double-strand DNA breaks (DSBs) continuously arise and cause mutations and chromosomal rearrangements. Here, we present DSBCapture, a sequencing-based method that captures DSBs in situ and directly maps these at single-nucleotide resolution, enabling the study of DSB origin. DSBCapture shows substantially increased sensitivity and data yield compared with other methods. Using DSBCapture, we uncovered a striking relationship between DSBs and elevated transcription within nucleosome-depleted chromatin.
Authors:
SV Lensing, G Marsico, R Hänsel-Hertsch, EY Lam, D Tannahill, S Balasubramanian
Journal:
Nat Methods
Citation info:
13(10):855-857
Publication date:
1st Oct 2016
Full text
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