DSBCapture: in situ capture and sequencing of DNA breaks.
- Abstract:
- Double-strand DNA breaks (DSBs) continuously arise and cause mutations and chromosomal rearrangements. Here, we present DSBCapture, a sequencing-based method that captures DSBs in situ and directly maps these at single-nucleotide resolution, enabling the study of DSB origin. DSBCapture shows substantially increased sensitivity and data yield compared with other methods. Using DSBCapture, we uncovered a striking relationship between DSBs and elevated transcription within nucleosome-depleted chromatin.
- Authors:
- SV Lensing, G Marsico, R Hänsel-Hertsch, EY Lam, D Tannahill, S Balasubramanian
- Journal:
- Nat Methods
- Citation info:
- 13(10):855-857
- Publication date:
- 1st Oct 2016
- Full text
- DOI