Authors:
NA Fonseca, J Rung, A Brazma, JC Marioni
Journal name: 
Bioinformatics
Citation info: 
28(24):3169-3177
Abstract: 
MOTIVATION: A ubiquitous and fundamental step in high-throughput sequencing analysis is the alignment (mapping) of the generated reads to a reference sequence. To accomplish this task, numerous software tools have been proposed. Determining the mappers that are most suitable for a specific application is not trivial. RESULTS: This survey focuses on classifying mappers through a wide number of characteristics. The goal is to allow practitioners to compare the mappers more easily and find those that are most suitable for their specific problem.
DOI: 
http://doi.org/10.1093/bioinformatics/bts605
Research group: 
Marioni Group
E-pub date: 
15 Dec 2012